TRES : k-tuple search
Results of TRES: K-tuple Search
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The sequences submitted by you.....
Sequence Seq-length Location of TATA-BOX relative to end of sequence
S79457 Human 400 -96
S79462 Mouse 400 -101
M17247 Mole-Ra 400 -91
M17627 Chicken 400 -110
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Site locations are relative to............. TATA-BOX
Sites are reported only if present in
a minimum of............................. 4 out of total 4 sequences
Mismatches allowed are at most............. 1 in 15 bases
( * indicate mismatch )
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The k-tuple size is........................ 15
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15-tuple->> TAATGCCTCCATTCT ( compli. sequence.. AGAATGGAGGCATTA )
S79457 Human -25 TAATGCCGCCATTCT*
S79462 Mouse -24 TAATTCCTCCATTCT*
M17247 Mole-Rat -26 TAATGCCTCCATTCT
M17627 Chicken -27 TAATGCCTTCATTCT*
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15-tuple->> AATGCCTCCATTCTG ( compli. sequence.. CAGAATGGAGGCATT )
S79457 Human -24 AATGCCGCCATTCTG*
S79462 Mouse -23 AATTCCTCCATTCTG*
M17247 Mole-Rat -25 AATGCCTCCATTCTG
M17627 Chicken -26 AATGCCTTCATTCTG*
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Total k-tuples searched = 1540
Total k-tuples conserved = 2
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TRES : Transcription Regulatory Element Search
Division of Biochemical Sciences, National Chemical Laboratory, Pune 411008, INDIA