TRES : k-tuple search

  Results of TRES: K-tuple Search 
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  The sequences submitted by you..... 
 
  Sequence      Seq-length   Location of TATA-BOX relative to end of sequence 

  S79457 Human      400           -96  
  S79462 Mouse      400          -101  
  M17247 Mole-Ra    400           -91  
  M17627 Chicken    400          -110  
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  Site locations are relative to.............     TATA-BOX  
  Sites are reported only if present in  
    a minimum of.............................     4 out of total 4 sequences
  Mismatches allowed are at most.............     1 in 15 bases    
    ( * indicate mismatch ) 
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  The k-tuple size is........................     15 
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  15-tuple->> TAATGCCTCCATTCT  ( compli. sequence..  AGAATGGAGGCATTA ) 
 
  S79457 Human                  -25 TAATGCCGCCATTCT*  
  S79462 Mouse                  -24 TAATTCCTCCATTCT*  
  M17247 Mole-Rat               -26 TAATGCCTCCATTCT   
  M17627 Chicken                -27 TAATGCCTTCATTCT*  

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  15-tuple->> AATGCCTCCATTCTG  ( compli. sequence..  CAGAATGGAGGCATT ) 
 
  S79457 Human                  -24 AATGCCGCCATTCTG*  
  S79462 Mouse                  -23 AATTCCTCCATTCTG*  
  M17247 Mole-Rat               -25 AATGCCTCCATTCTG   
  M17627 Chicken                -26 AATGCCTTCATTCTG*  

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 Total k-tuples searched   = 1540 
 Total k-tuples conserved  =    2 
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TRES : Transcription Regulatory Element Search
Division of Biochemical Sciences, National Chemical Laboratory, Pune 411008, INDIA