CLUSTAL W(1.60) multiple sequence alignment at default parameters
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 Multiple alignment of 400 bp (5'to CDS) promoter sequence of 
 Alfa-A Crystallin genes of human, mouse, mole-rat and chicken
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				Pairwise alignment scores
	S79457 Human......	100
	S79462 Mouse......	 50	100
	M17247 Mole-rat...	 54	 70	100 
	M17627 Chicken....	 48	 42 	 44	100

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S79457_Hum      -----------TGTGCAGAGAACTAGCATGGTCCCTGGCACGTAGCCCCTGCCCAGTGAC
S79462_Mou      CTAATCTGTGCCTACCTCTCCCCACCTGTGAAACAGGGCTCTGAATTCTTCCTCCAAAGG
M17247_Mol      ------GACAGCTTGCAAAGCACATCTGTGGAACAGGGCACTGAACTCTAAGGGCA--GG
M17627_Chi      --------------------AAGAAGCCGAGGGCTGGGGGCAAAGATCCACAGAAGGGGC
                                                 *  **  *  *   *            

S79457_Hum      TGGCAGATGAGAAGCTCCATTGTCGCCCCAGGGAGTATGGGGCACAGGCGCCTCCTTGGG
S79462_Mou      AGGCCAGGAGGATGCCTCAGTA-CAATGTGGGAAGAAACAGTGATGTCCCTTGGCTCAAA
M17247_Mol      CAGCCATGAGGAACCCTCAGGA-CAAAGCGCAAA-AACCAGCATTACTCCCTGGTGGGGA
M17627_Chi      CTCCTCCCCAGACATCCCTTAG--AAGCTGCCTGGCAGCTCTTGTTCATCCAGATGATAC
                   *      **     *                  *                       

S79457_Hum      TTGTCTGCCTCCCGGGAGCCCCAGGGTGC---------CCAGGCGGGCCTCAGC-TGAGT
S79462_Mou      GGATAAGGCTCTCCACAGACCTTC--------------TTGGAGACATCTGGTC-TGAG-
M17247_Mol      GGATGAGACTCTCCACAGCCCTCCACCACCCCACTTCTTTGGGGACATCTGGAA-GGAGT
M17627_Chi      CGATGCCCCTGGGCAGAAACCGTCCCATGCATCACAGCCTGGCAGCATCCCTCCAGGAGA
                   *    **      *  **                    *      *       *** 

S79457_Hum      CCAGGCCTCGGGGACAGTCCGTGCACGCTCCTGGGGCTGGG--GGCGGGCACTTGTCCCA
S79462_Mou      ---AGCCTCTGCTGC--TCAGCGTGTGTTGCTGGGGCTGGGCAGGCGGGTGAGCATTCCA
M17247_Mol      ACTGGCCCCTGCTGC--TCAGTGTGTGTCCCTGGGGCTGGGGTGGAGGGTAAG-ATCCCT
M17627_Chi      TCTGGCGCTGGTTCCCACCAGACTGTCATCCCCAGGTCAGT-------CTCCGCATTTCT
                    **    *   *   * *         *   **   *               *  * 

S79457_Hum      GCCACGTTTCTGCTGACTGAGCAGCCTTCTTCATGAGCT---CACGCCTTTCCAGAGAAA
S79462_Mou      GC--------TGCTGACGGTGCAGCCTCTCCCCCGAGCTGAGCATAGACATTTTGGGAAA
M17247_Mol      GC--------TGCTGACCGTGCAGCCTCCCTCCAGAGCTGAGCATAGGCATTTCGTGAAA
M17627_Chi      GC-----------TGACCACGTTGCCTTCGTCGTGAGAT---CATGTCTTTCCAGAGAAA
                **           ****   *  ****    *  *** *   **      *   * ****

S79457_Hum      TCCC-TTAATGCCGCCATTCTGCTGGTG--GCATATATAGGGAGGGCTCG-GCCTTGGCT
S79462_Mou      TCCC-TTAATTCCTCCATTCTG-TGCAG--GCATATATAGGGAGGGCTGGAACGCTAGCT
M17247_Mol      TCCC-TTAATGCCTCCATTCTG-TGCCG--GCGTATATAGGGAGGGCCAGCACACGAGCT
M17627_Chi      TCCCACTAATGCCTTCATTCTGCGAGTGCAGTATATATAGGGGCAGCCTT-CCCCGGGCT
                ****  **** **  *******     *  *  *********   **     *    ***

S79457_Hum      CCACACTGGCTG---CCAGAGGCCCCG--CTGACTC-CTGCCAGCCTCCAGGTCCCCGTG
S79462_Mou      CACCACCGCACTGC-CCAGAGGCTCCTGTCTGACTCACTGCCAGCCTTC-GGTCCCTGCA
M17247_Mol      CCCCACT--------CCAGCGGCCCCTGCCCGACTCACCACCAGCCTTC-AGTCCCTGCG
M17627_Chi      GCACTGTGCAGGCCAGCAAAGGCATCG--CTGTCCTCCGAGCGGTTGCGCGGCTCCCACG
                   *            **  ***  *   * * *   *   * *       *  **    

S79457_Hum      GTACCAAAGCTGAACA----------
S79462_Mou      TCAACCAAATAGAAGA----------
M17247_Mol      TTG-CCACGTGGAACA----------
M17627_Chi      CTCTCCTGTTAGAACAAGACATAGCA
                    *      *** *            
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